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Please review the QC test results indicated by check icon below as well as clone information before placing your order.

GEPRA-AA/ pT2KXIGdeltain

Expression vector of genetically encoded indicator for RA, GEPRA. For generation of transgenic zebrafish. Low-affinity verson of the GEPRA-B.

Catalog number RDB15254
Resource name GEPRA-AA/ pT2KXIGdeltain
Clone info. Expression vector of genetically encoded indicator for RA, GEPRA. For generation of transgenic zebrafish. Low-affinity verson of the GEPRA-B, having ligand binding domain from the RAR-beta with two amino acid substitutions (R269A and S280A).
Vector backbone pT2KXIG deltain (plasmid)
Size of vector backbone 8.1 kb
Selectable markers Amp^r
Gene/insert name mouse RARbeta cDNA Aequorea victoria GFP cDNA
Depositor|Developer Miyawaki, Atsushi |
Other clones in our bank

External Database
mouse RARbeta Aequorea victoria GFP

          Reference sequence
            
           

          Distribution information

          Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
          Terms and conditions for distribution 1. The RECIPIENT should obtain written approval from the DEPOSITOR using the APPROVAL FORM prior to entering the AGREEMENT with the RIKEN BRC.
          2. A RECIPIENT who belongs to a non-profit organization may use the BIOLOGICAL RESOURCE for an academic research that is non-commercial.
          3. In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, citations of literature designated by the DEPOSITOR or an acknowledgment to the DEPOSITOR are requested.
          Shimozono S, Iimura T, Kitaguchi T, Higashijima S, Miyawaki A. (2013) Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366.
          4. The RECIPIENT agrees to provide a copy of the publication to the DEPOSITOR, oral or written, reporting use of the MATERIAL.
          5. The Recipient's Scientist agrees not to transfer the MATERIAL to any third party including any resource centers without the prior written consent of DEPOSITOR.
          Additional terms and conditions:
          The Tol2 system is covered by patents owned by the National Institute of Genetics (NIG) Japan. For use of the Tol2 system except for internal academic research, the RECIPIENT must contact a NIG license representative at chizai@nig.ac.jp.
          Ordering Please visit Information of Request for Distribution.[link] 
          Order form 
          [Credit Card Payment]  [Bank Transfer Payment]
          Material Transfer Agreement (MTA for use for not-for-profit academic purpose) [Word]
          Approval form [Word] by Dr. Atsushi Miyawaki
          Remarks
          Please obtain written approval of Dr. Atsushi Miyawaki.
          提供案内 (日本国内) [open/close]

          提供条件 1. The RECIPIENT should obtain written approval from the DEPOSITOR using the APPROVAL FORM prior to entering the AGREEMENT with the RIKEN BRC.
          2. A RECIPIENT who belongs to a non-profit organization may use the BIOLOGICAL RESOURCE for an academic research that is non-commercial.
          3. In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, citations of literature designated by the DEPOSITOR or an acknowledgment to the DEPOSITOR are requested.
          Shimozono S, Iimura T, Kitaguchi T, Higashijima S, Miyawaki A. (2013) Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366.
          4. The RECIPIENT agrees to provide a copy of the publication to the DEPOSITOR, oral or written, reporting use of the MATERIAL.
          5. The Recipient's Scientist agrees not to transfer the MATERIAL to any third party including any resource centers without the prior written consent of DEPOSITOR.
          付加的提供条件:
          Tol2 systemは、国立遺伝学研究所が特許を保有している。学術内部利用以外の利用の際は、国立遺伝学研究所 (chizai@nig.ac.jp) に連絡すること。
          提供依頼 手続きの詳細は、「提供申込みについて[link]」をご覧ください。
          提供依頼書 [Word]
          提供同意書 (MTA、非営利機関による非営利学術研究用)[Word]
          宮脇敦史博士による提供承諾書 [Word]
          備考 提供条件は英文のまま記載してください。
          宮脇敦史博士の書面による提供承諾が必要です。

          Catalog # Resource name Shipping form Fee (non-profit org.)
          RDB15254 GEPRA-AA/ pT2KXIGdeltain DNA solution

          Please review the QC test results indicated by check icon below as well as clone information before placing your order.

          References and tips

          Original reference

          original Shimozono, S., Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366 (2013). PMID 23563268.

          Further references such as user reports and related articles (go to bottom)

          Featured content

          Featured content Sensor and Visualization (English text)

          QC test results

          RIKEN BRC has sequenced portions of this material for quality test.
          Please review the QC test results indicated by check icon as well as clone information before placing your order.

          Test sheet RDB15254_A7H9p1.pdf check

          Nucleotide sequence of a portion of this resource (if available).

          Primer: EF1a-C_F2
          Sequence file: RDB15254_A7H9a.seq check
          >D04498G3-1_A7H9_EF1a-C_F2_C11_08_ABI24.ab1
              1 GGTGGGGGTT AGGCGGTTCG CTCTCTTCCT CACCGGGTCT GCGGCGAGTT CTAGCTGAAG
             61 CTTCCTGCAG GTCGACCGAT CCTGAGAACT TCAGGGTGAG TTTGGGGACC CTTGATTGTT
            121 CTTTCTTTTT CGCTATTGTA AAATTCATGT TATATGGAGG GGGCAAAGTT TTCAGGGTGT
            181 TGTTTAGAAT GGGAAGATGT CCCTTGTATC ACCATGGACC CTCATGATAA TTTTGTTTCT
            241 TTCACTTTCT ACTCTGTTGA CAACCATTGT CTCCTCTTAT TTTCTTTTCA TTTTCTGTAA
            301 CTTTTTCGTT AAACTTTAGC TTGCATTTGT AACGAATTTT TAAATTCACT TTTGTTTATT
            361 TGTCAGATTG TAAGTACTTT CTCTAATCAC TTTTTTTTCA AGGCAATCAG GGTATATTAT
            421 ATTGTACTTC AGCACAGTTT TAGAGAACAA TTGTTATAAT TAAATGATAA GGTAGAATAT
            481 TTCTGCATAT AAATTCTGGC TGGCGTGGAA ATATTCTTAT TGGTAGAAAC AACTACACCC
            541 TGGTCATCAT CCTGCCTTTC TCTTTATGGT TACAATGATA TACACTGTTT GAGATGAGGA
            601 TAAAATACTC TGAGTCCAAA CCGGGCCCCT CTGCTAACCA TGTTCATGCC TTCTTCTCTT
            661 TCCTACAGCT CCTGGGCAAC GTGCTGGTTG TTGTGCTGTC TCATCATTTT GGCAAAGAAT
            721 TCCTCGACGG ATCCCATGGT GAGCAAGGGC GAGGAGCTGT TCACCGGGGT GGTGCCCATC
            781 CTGGTCGAGC TGCAGGGCGA CGTAAACGGC CACAAGTTCA GCGTGTCCGG CGAGGGCGAG
            841 GGCGATGCCA CCTACGGCAA GCTGACCCTG AAGTTCATCT GCACCACCGG CAAGCTGCCC
            901 GTGCCCTGGC CCACCCTCGT GACCACCCTG AGCTGGGGCG TGCAGTGCTT CAGCCGCTAC
            961 CCCGACCACA TGAAAGCAGC ACGACTTTCT TTCAAGTCCC GTCATGCCCG AAGCTACGTC
           1021 CAGGAGCGCA CCCATCCTCC TTCAAGGACG ACCGCACTAC CAGGACCGCG CGAGTTGAGG
          1081 TTCGAGGCGA CACCTGGTGA CCGCATCGAG CCTGGATGGT CAATTCGAAC CTTCCA
          //
          Primer: pAxCALNL_F1
          Sequence file: RDB15254_A7H9b.seq check
          >D04498G3-1_A7H9_pAxCALNL_F1_D11_11_ABI24.ab1
              1 ATTATCTATC TTATCATGTC TGGATCATCA TCGATGAATT AATTCGAGCT CCACCGCGGT
             61 GGCGGCCGCT CTAGATGCAT GCTCGAGTTA CTTGTACAGC TCGTTCATGC CTTCAGTGAT
            121 CCCGGCGGCG GTCAGGAACT CCAGCAGGAC CATGTGATCG CGCTTCTCGT TGGGGTCTTT
            181 GAACAGGGCG GACTGGTAGC TCAGGTAGTG GTTGTCGGGC AGCAGCACGG GGCCGTCGCC
            241 GATGGGGGTG TTCTGCTGGT AGTGGTCGGC GAGCTGCACG CCGCCGTCCT CGATGTTGTG
            301 GCGGATCTTG AAGTTGGCCT TGATGCCGTT CTTCTGCTTG TCGGCGGTGA TATAGACGTT
            361 GTGGCTGTTG TAGTTGTACT CCAGCTTGTG CCCCAGGATG TTGCCGTCCT CCTTGAAGTC
            421 GATGCCCTTC AGCTCGATGC GGTTCACCAG GGTGTCGCCC TCGAACTTCA CCTCGGCGCG
            481 GGTCTTGTAG TTGCCGTCGT CCTTGAAGAA GATGGTGCGC TCCTGGACGT AGCCTTCGGG
            541 CATGGCGGAC TTGAAGAAGT CGTGCTGCTT CATGTGGTCG GGGTAGCGGG CGAAGCACTG
            601 CAGGCCGTAG CCCAGGGTGG TCACGAGGGT GGGCCAGGGC ACGGGCAGCT TGCCGGTGGT
            661 GCAGAGCAGC TTCAGGGTCA GCTTGCCGTA GGTGGCATCG CCCTCGCCCT CGCCGGACAC
            721 GCTGAACTTG TGGCCGTTTA CGTCGCCGTC CAGCTCGACC AGGATGGGCA CCACCCCGGT
            781 GAACAGCTCC TCGCCCTTGC TCACCATGAG CTCTTCATGT CCTTCAGAAT TCTCCAGCAT
            841 TTCCTGAATG AGAGGTGGCA TTGATCCAGG AATTTCCATT TTCAAAGGTA ATTACACGTT
            901 CGGCACCTTT CGCGCTGATG CTGCGGAGAT CTGTGATTTT CATTAAGATC TTTGGAAACA
            961 TGTGAGGCTT TGCTGGGTCG TCGTTTTCTA ATGTAAATCT TTAGTGCTTT CCAGCAGTGG
           1021 TTCTTCTAGC TTGTCTACTT TTGATGGTTT CCTCACGTCT GACCGGGTCT CAACAGATCA
          1081 AACAGATTGC AACTGAGACG CCTTGCTTGT GTGGGTGATC CAATC
          //
          Primer: RARbeta_LBD
          Sequence file: RDB15254_A7H9c.seq check
          >D04498G3_1_A7H9_RARbeta_LBD_H01_08_ABI08.ab1
              1 CGGTAGGAAA AAGGTGGCAT TGATCCAGGA ATTTCCATTT TCAAGGTAAT TACACGTTCG
             61 GCACCTTTCG CGCTGATGCT GCGGAGATCT GTGATTTTCA TTAAGATCTT TGGAAACATG
            121 TGAGGCTTGC TGGGTCGTCG TTTTCTAATG TAAATCTTTA GTGCTTCCAG CAGTGGTTCT
            181 TGGAGCTTGT CTACTTTTGT TGGTTCCTCA AGGTCCTGGC GGTCTCCACA GATTAAACAG
            241 ATGGCACTGA GAAGGCCTGT TTCTGTGTCA TCCATTTCCA AAGGCAGGAG CTGGTTGGCA
            301 AAGGTGAACA CAAGGTCAGT CAGAGGACCG AAGCCAGCAT TGTGCATCTG AGTTCGATTT
            361 AGTGTAAGGC CATCAGCGAA AGTCATGGTG TCTTGCTCTG GGGTATAGGC GGTACAAATT
            421 CTGAGAATCA AGATATCCAA GCAGGCGGCT TTGAGCAGGG TGATCTGGTC TGCGATGGTC
            481 AGACCTGTGA AGCCCGGCAG ACGCTTGGCG AACTCCACGA TCTTAATAAT GCACTTGGTG
            541 GCCAGCTCAC TGAATTTGTC CCAGAGGCCC AAGTCCAATC GGACCCGGTG GTCAGCGCTG
            601 GAATTCGTGG TGTATTTACC CAGCTGGCAG AGTGAGGGAA AGGTTTCCTG GTGGGCTTTC
            661 CGGATCTTCT CAGTGAGGTC GTCTAGCTCC GCTGTCATCT CATAGCTCTC ATGCATGCGG
            721 GCGGCGGTCA CGAACTCCAG CAGGACCATG TGATCGCGCT TCTCGTTGGG GTCTTTGCTC
            781 AGGGCGGACT GGGTGCTCAG GTAGTGGTTG TCGGGCAGGT TCACGGGGCC GTCGCCGATG
            841 GGGGTGTTCT GCTGGTAGTG GTCGGCGAGC TGCACGCTGC CGTCCACGAT GTTGTGGCGG
            901 ATCTTGAAGT TGGCCTTGAT GCCGTTCTTC TGCTTGTCGG CGGTGATATA GACGTTGTGG
            961 CTGATGTAGT TGTACTCCAG CTTGTGCCCC AGGATGTTGC CCGTCCTCCC TTGAAGTCGA
           1021 TGCCCTTCAG CTCGAATGCG GTTCACAGGG TGTCGCCTCG AACTTTCACT CGGCGCGGGT
           1081 CCTGTAGGTG CGGTCGTCCT GGAGGAGATT GGGTGCGCCT CCTGGACGTA GCCCTTTCGG
          1141 GGCATGGAAC G
          //
          Primer: EF1a-N_R2
          Sequence file: RDB15254_A7H9d.seq check
          >D04498G3-1_A7H9_EF1a-N_R2_E11_14_ABI24.ab1
              1 TTACGGGCAA GATTGCAGTT TGATTTGCAT TGGAAAGGGT CGCTGGCTTT TGTGTTACAC
             61 GCCCCTTATT TGTGCTTGAT TAGATGATCC CCCTGCTCGA GGGCCCATCT GGCCTGTGTT
            121 TCAGACACCA GGGAGTCTCT GCTCACGTTT CCTGCTATTT GCAGCCTCTC TATCAAGACT
            181 AATACACCTC TTCCCGCATC GGCTGCCTGT GAGAGGCTTT TCAGCACTGC AGGATTGCTT
            241 TTCAGCCCCA AAAGAGCTAG GCTTGACACT AACAATTTTG AGAATCAGCT TCTACTGAAG
            301 TTAAATCTGA GGTTTTACAA CTTTGAGTAG CGTGTACTGG CATTAGATTG TCTGTCTTAT
            361 AGTTTGATAA TTAAATACAA ACAGTTCTAA AGCAGGATAA AACCTTGTAT GCATTTCATT
            421 TAATGTTTTT TGAGATTAAA AGCTTAAACA AGAATCTCTA GTTTTCTTTC TTGCTTTTAC
            481 TTTTACTTCC TTAATACTCA AGTACAATTT TAATGGAGTA CTTTTTTACT TTTACTCAAG
            541 TAAGATTCTA GCCAGATACT TTTACTTTTA ATTGAGTAAA ATTTTCCCTA AGTACTTGTA
            601 CTTTCACTTG AGTAAAATTT TTGAGTACTT TTTACACCTC TGTCAAGAAC TCCTGGACAA
            661 ACCTCTGACC TGTGTGGAAC AGAGTGGATA TGGGTGTCTG AACAGATATT CACGTCTTTT
            721 GCAGATCAGA GGGCATTTCT GGTGTTGTGC AATGACCTGG GTCCAACAGG TAGGCGTACT
            781 CGTATCCAAG AGCATTGTTG GACAGGAGGT AGTCTCCATT CCTATAAAGA GGAAGGAATG
            841 GCACCATGTA GTAGCCGTCA TTGTGGCCAA TTGGTGCATT GGTACGTGGG TAGATGGACC
            901 GGGGAGGCTG ATGAGTTCTT AGCCAGCGCT CAAGATGCTA GAAATGATGT AAGAAACAAA
            961 TATGCAGATG AAAGTTTAAG ATAAGATAAA AAATTAAAAC AATAAATGCA ATTATGTTTT
           1021 GTGTTTCTAT CCACCAATTA TTATCTCCAC GCAGTAAAGC CACCAAGAAT ATTTTTTGGT
          1081 CCTTGCTCTG CAGCAAGTCA CCTTACATTG AATCTCAACT GTGA
          //
          Primer: pT2KXIG#1
          Sequence file: RDB15254_A7H9e.seq check
          >D04498G3_1_A7H9_pT2KXIG#1_G01_07_ABI08.ab1
              1 AGGCCGCCAA TTAACCTCAC TAAAGGGAAC AAAAGCTGGA GCTCCACCGC GGTGGCGGCC
             61 GCTCTAGAAC TAGTGGATCT GCTGGGCTTG CTGAAGGTAG GGGGTCAAGA ACCAGAGGTG
            121 TAAAGTACTT GAGTAATTTT ACTTGATTAC TGTACTTAAG TATTATTTTT GGGGATTTTT
            181 ACTTTACTTG AGTACAATTA AAAATCAATA CTTTTACTTT TACTTAATTA CATTTTTTTA
            241 GAAAAAAAAG TACTTTTTAC TCCTTACAAT TTTATTTACA GTCAAAAAGT ACTTATTTTT
            301 TGGAGATCAC TTCATTCTAT TTTCCCTTGC TATTACCAAA CCAATTGAAT TGCGCTGATG
            361 CCCAGTTTAA TTTAAATGTT ATTTATTCTG CCTATGAAAA TCGTTTTCAC ATTATATGAA
            421 ATTGGTCAGA CATGTTCATT GGTCCTTTGG AAGTGACGTC ATGTCACATC TATTACCACA
            481 ATGCACAGCA CCTTGACCTG GAAATTAGGG AAATTATAAC AGTCAATCAG TGGAAGAAAA
            541 TGGAGGAAGT ATGTGATTCA TCAGCAGCTG CGAGCAGCAC AGTCCAAAAT CAGCCACAGG
            601 ATCAAGAGCA CCCGTGGCCG TATCTTCGCA GATCTGATCT AGAGGATCAT AATCAGCCAT
            661 ACCACATTTG TAGAGGTTTT ACTTGCTTTA AAAAACCTCC CACACCTCCC CCTGAACCTG
            721 AAACATAAAA TGAATGCAAT TGTTGTTGTT AACTTGTTTA TTGCAGCTTA TAATGGTTAC
            781 AAATAAAGCA ATAGCATCAC AAATTTCACA AATAAAGCAT TTTTTTCACT GCATTCTAGT
            841 TGTGGTTTGT CCAAACTCAT CAATGTATCT TATCATGTCT GGATCATCAT CGATGAATTA
            901 ATTCGAGCTC CACCGCGGTG GCGGCCGCTC TAGATGCATG CTCGAGTTAC TTGTACAGCT
            961 CGTTCATGCC CTTCAGTGAT CCCGGCGGCG GTCAGGAACT CCAGCAGGAC CATGTGATCG
           1021 CGCTTCTCGT TGGGGTCTTT TGAACAGGCG GACTGGTAGC TCAGTAGTGG GTTGTCGGCA
           1081 AGCAGCACGG TGGTCGCTGA TGGGGGTGTT CTGCTGGTAG TGATCCGCCG AGCCTGCACG
          1141 GCCGGCCGAT CCCTTCGCGA ATGGTTTGTT GTG
          //

          Please visit Sequencing and PCR primers for primer information.


          References

          Original, user report and related articles

          original Shimozono, S., Visualization of an endogenous retinoic acid gradient across embryonic development. Nature 496 (7445): 363-366 (2013). PMID 23563268.
          review Schilling, T.F., Visualizing retinoic acid morphogen gradients. Methods Cell Biol. 133: 139-163 (2016). PMID 27263412.

          2023.04.10

          GNP_filter3_RDBDEP_html_230405.pl