Plasmid vector for high efficiency genome editing oligo DNA containing target sequence.
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External Database Streptococcus pyogenes Cas9 Aequorea victoria GFP Reference sequence |
Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
Terms and conditions for distribution | In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature designated by the DEPOSITOR (Nagasaki, A et al. Plasmid. 98, 37-44, 2018) is requested. |
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Ordering | Order form [Credit Card Payment] [Bank Transfer Payment] Exclusive MTA (For the DNA materials containing CRISPR/Cas9 technologies and for not-for-profit academic purpose) [Word] Please visit Information of Request for Distribution.[link] |
Remarks | The BIOLOGICAL RESOURCE contains CRISPR/Cas9 technologies and is not provided to for-profit organization or for for-profit research by non-profit organizations. |
提供条件 | 利用者は、研究成果の公表にあたって寄託者の指定する文献 (Nagasaki, A et al. Plasmid. 98, 37-44, 2018)の引用を必要とする。 |
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提供依頼 | 提供依頼書 [Word] 専用MTA(CRISPR/Cas9内包遺伝子材料専用 非営利学術目的)をお使いください [Word] 手続きの概要は、「提供申込みについて[link]」をご覧ください。 |
備考 | 本件リソースはCRISPR/Cas9 technologyを用いたゲノム編集バイオリソースです。営利機関および非営利機関による営利目的研究には提供いたしません。 |
Catalog # | Resource name | Shipping form | Fee (non-profit org.) |
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RDB16763 | pGedit | DNA solution |
Materials & Methods section:
The pGedit was provided by the RIKEN BRC through the National BioResource Project of the MEXT, Japan (cat. RDB16763). |
Reference section:
Nagasaki, A., Kato, Y., Meguro, K., Yamagishi, A., Nakamura, C., Uyeda, T.Q.P., A genome editing vector that enables easy selection and identification of knockout cells. Plasmid 98: 37-44 (2018). PMID 30196057. [link to RRC of NBRP] |
Further references such as user reports and related articles (go to bottom)
Featured content
Featured content | (Japanese text) |
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Featured content | Genome Editing (English text) |
Featured content | Genome Editing (Japanese text) |
RIKEN BRC has sequenced portions of this material for quality test.
Please review the QC test results indicated by icon as well as clone information before placing your order.
Test sheet | RDB16763_A8Kkp1-4.pdf |
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Nucleotide sequence of a portion of this resource (if available).
Primer: M13_-40 (Pr0410) Region: T7 pro,U6 pro,gRDA scaffold,T3 pro Sequence file: RDB16763_A8Kke.seq |
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>D05970A1_A8Kk_2_M13_-40_A04_01_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNNNANTNN CTATAGGGCG AATTGGGTAC CAAGGTCGGG 61 CAGGAAGAGG GCCTATTTCC CATGATTCCT TCATATTTGC ATATACGATA CAAGGCTGTT 121 AGAGAGATAA TTAGAATTAA TTTGACTGTA AACACAAAGA TATTAGTACA AAATACGTGA 181 CGTAGAAAGT AATAATTTCT TGGGTAGTTT GCAGTTTTAA AATTATGTTT TAAAATGGAC 241 TATCATATGC TTACCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG 301 AAAGGACGAA ACACCGGAGA CGAATTCGTC TCTTTAAGAG CTAGAAATAG CAAGTTTAAA 361 TAAGGCTAGT CCGTTATCAA CTTGAAAAAG TGGCACCGAG TCGGTGCTTT TTTTTCTAGA 421 GCGGCCGCCA CCGCGGTGGA GCTCCAGCTT TTGTTCCCTT TAGTGAGGGT TAATTTCGAG 481 CTTGGCGTAA TCANGNNCAT NNCTGTTTCC TGTGTGAAAT TGTTATCCGC TCACAATTCC 541 ACACAACATA CGAGCCGGAA GCATAAAGTG TAAAGCCTGG GGTGCCTAAT GAGTGAGCTA 601 ACTCACATTA ATTGCGTTGC GCTCACTGCC CGCTTTCCAG TCGGGAAACC TGTCGTGCCA 661 GCTGCATTAA TGAATCGGCC AACGCGCGGG GAGAGGCGGT TTGCGTATTG GGCGCTCTTC 721 CGCTTCCTCG CTCACTGACT CGCTGCGCTC GGTCGTTCGG CTGCGGCGAG CGGTATCAGC 781 TCACTCAAAG GCGGTAATAC GGTTATCCAC AGAATCANGG GATAACGCAN GAAAGAACAT 841 GTGAGCAAAA GGCCAGCNAA AGGNCAGGAA NCGTAAAAAN GCCGCGTTGC TGGCGTTTTT 901 CCNTANGCNN CGCCCCCNNG ANNANCATCN CAAAAATCNA CGCTCNAGTC ANANGNGGNN 961 AANNCCGACN NGANTATAAA GANNCCANNN GTTTCCNNNT NNAANCNCCC NNNNGCNNTN 1021 NNNNGNNNNN ANNNNNNNNN N // |
Primer: CMV_Forward (Pr0016) Region: CMV pro,Cas9 5' Sequence file: RDB16763_A8Kkf.seq |
>D05970A1_A8Kk_2_CMV Forward_B04_02_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNATGGG CGGTAGGCGT GTANCGGTGG 61 GAGGNNNNNN NAAGCANNAG CTGGTTTAGT GAACCGTCAG ATCCGCTAGC ATGGACAAGA 121 AGTACAGCAT CGGCCTGGAC ATCGGCACCA ACTCTGTGGG CTGGGCCGTG ATCACCGACG 181 ACTACAAGGT GCCCAGCAAG AAATTCAAGG TGCTGGGCAA CACCGACCGG CACAGCATCA 241 AGAAGAACCT GATCGGCGCC CTGCTGTTCG GCTCTGGCGA AACAGCCGAG GCCACCCGGC 301 TGAAGAGAAC CGCCAGAAGA AGATACACCA GACGGAAGAA CCGGATCTGC TATCTGCAAG 361 AGATCTTCAG CAACGAGATG GCCAAGGTGG ACGACAGCTT CTTCCACAGA CTGGAAGAGT 421 CCTTCCTGGT GGAAGAGGAT AAGAAGCACG AGCGGCACCC CATCTTCGGC AACATCGTGG 481 ACGAGGTGGC CTACCACGAG AAGTACCCCA CCATCTACCA CCTGAGAAAG AAGCTGGCCG 541 ACAGCACCGA CAAGGCCGAC CTGAGACTGA TCTACCTGGC CCTGGCCCAC ATGATCAAGT 601 TCCGGGGCCA CTTCCTGATC GAGGGCGACC TGAACCCCGA CAACAGCGAC GTGGACAAGC 661 TGTTCATCCA GCTGGTGCAG ATCTACAATC AGCTGTTCGA GGAAAACCCC ATCAACGCCA 721 GCAGAGTGGA CGCCAANGCC ATCCTGAGCG CCNNACTGAG CAAGAGCAGA CGGCTGGAAA 781 ATCTGATCGC CCANCTGCCC GGCGAGAAGC GGAATGGCCT GTNCGGCNNC CTGATTGCCC 841 TGANCCTGGG CCNGANCCCC AACTTCNNNA GCAACTTCNN NNNTGNNNGA NGANGCCNAA 901 CTGCAGCTGA NCNNGGACAC CTACGACGAN NACCTGNNNN NNCTGCTGGC CCNNATCNGN 961 NGANCANNAC NNCGACCTGT TTCNNGNCNN CNAGAANCNT GTNNNANNNN NNNCNNGCNN 1021 ANCNNCNTNC NNNANNNNNN NNNN // |
Primer: EGFP-N (Pr0027) Region: T2A,SV40 NLS,Cas9 3' Sequence file: RDB16763_A8Kkg.seq |
>D05970A1_A8Kk_2_EGFP-N_D04_04_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNTCGCCCT TGCTNNCNNT GGTGGCGANC GGTATCGATC 61 GTGGGCCAGG ATTCTCCTCG ACGTCACCGC ATGTTAGCAG ACTTCCTCTG CCCTCTCCAC 121 TGCCGTTAAC CACTTTGCGC TTTTTCTTGG GGTCGCCTCC CAGCTGAGAC AGGTCGATCC 181 GTGTCTCGTA CAGGCCGGTG ATGCTCTGGT GGATCAGGGT GGCGTCCAGC ACCTCTTTGG 241 TGCTGGTGTA CCTCTTCCGG TCGATGGTGG TGTCAAAGTA CTTGAAGGCG GCAGGGGCTC 301 CCAGGTTGGT CAGGGTAAAC AGGTGGATGA TATTCTCGGC CTGCTCTCTG ATGGGCTTAT 361 CCCGGTGCTT GTTGTAGGCG CTCAGCACCT TGTCCAGGTT GGCATCGGCC AGGATCACGC 421 GCTTGGAGAA CTCGCTAATC TGCTCGATGA TCTCGTCCAG GTAGTGCTTG TGCTGTTCCA 481 CAAACAGCTG TTTCTGCTCA TTATCCTCGG GGGAGCCCTT CAGCTTCTCA TAGTGGCTGG 541 CCAGGTACAG GAAGTTCACA TATTTGGAGG GCAGGGCCAG CTCGTTTCCC TTCTGCAGTT 601 CGCCGGCAGA AGCCAGCATC CGCTTCCGGC CGTTTTCCAG CTCGAACAGG GAGTACTTAG 661 GCAGCTTGAT GATCAGGTCC TTTTTCACTT CTTTGTAGCC CTTGGCTTCC AGAAAGTCGA 721 TGGGATTCTT CTCGAAGCTG CTTCTTTCCA TGATGGTGAT CCCCANCAGC TCTTTCACAC 781 TCTTCAGTTN CTTGGACTTG CCCTTTTCCN CTTTGGCCAC CACCAGCACA GANTANGCCA 841 CGGNGGGNNT GTCAAAGCCG CCGTACTTCT TANGGNNCCN ATCCTTCTTT CTGGNNATCA 901 GCTTGNCNNA NTNNCTCTNN GGCAGGANAN NNTCTTNGCT GAANNCGNNN GNCTGNNNNN 961 CGNNCTTTTT NNACNANATT CNCTTGGGGN ANGGNNAGCN NTTTNNNNNN NNNN // |
Primer: pAxEF R2 (Pr0059) Region: SV40 pA,Bsr,EGFP 3' Sequence file: RDB16763_A8Kkh.seq |
>D05970A1_A8Kk_2_pAxEF-R2_D03_12_ABI24.ab1 1 NNNNNNNNNN NNGNTTNNNT TNNGANNTTG TGANGCTATT GCTTTATTTG TAACCATTAT 61 AAGCTGCAAT AAACAAGTTA ACAACAACAA TTGCATTCAT TTTATGTTTC AGGTTCAGGG 121 GGAGGTGTGG GAGGTTTTTT AAAGCAAGTA AAACCTCTAC AAATGTGGTA TGGCTGATTA 181 TGATCAGTTA TCTAGATCCG GTGGATCCCG GGCCCGCGGT ACGGACGAGT ACCTTAATTT 241 CGGGTATATT TGAGTGGAAT GAGTTCTTCA ATCGTAGTTT TGACTAACTT GCCATTCATT 301 TCTATTAACA CAAAACAATC TGGTGCATAG TCTGAAATCA ACTCCCTACA CATACCACAA 361 GGACTTACCA CTCGAATACT TCTATCTACT TCGTCAGAAT AAGGGTGTCT AACAGCTACA 421 ATCGTGTCAA AATCCTTTTG TCCATTCGAA ACTGCACTAC CAATCGCAAT GGCTTCTGCA 481 CAAACAGTTA CTCGTCCTAT ATACGCTTCA ATATGTACTG CCGAAATGAT TTCTCCTGTT 541 TTCGTACGAA TTGCCGCTCC CACATGATGT TTATTATCCT CATAAAGCAT TGTAATCTTC 601 TCTGTCGCTA CTTCTACTAA TTCTAGATCC TGTTGAGAAA TGTTAAATGT TTTCATTGGA 661 TCTGAGTACT TGTACAGCTC GTCCATGCCG AGAGTGATCC CGGCGGCGGT CACGAACTCC 721 AGCAGGACCA TGTGATCGCG CTTCTCGTTG GGGTCTTTGC TCAGGGCGGA CTGGGTGCTC 781 AGGTAGTGGT TGTCGGGCAG CAGCACGGGG CCGTCGCCGA TGGGGGTGTT CTGCTGGTAG 841 TGGTCGGCGA NCTGCACGCT GCCGTCCTCG ATGTTGTGGC GGATCTTGAN NTTCACCTTG 901 ATGNCGTTCT TCNGCTTGNC NGNCATGANA TAGANGTTGT NNNTGTTGTA NTTGTACTCC 961 AGCTTGNGCC CCNNGANGTT GNCGNCCNNC NNNANNNNNA NGNCNNTCNG CNNNANGCNG 1021 NNNCANCNNG NNNNNNNNNN // |
Primer: Amp_R (Pr0008) Region: CMV pro,Cas9 5' Sequence file: RDB16763_A8Kki.seq |
>16763_16763_B2G6F_Amp_R_A06_03_ABI24.ab1 1 NNNNNNNNNN NNNNNNNNNN NNNGNANNNN NNNNNNNGGG TTATTGTCTC NTGAGCGGAN 61 ACATATGCCA AGTACGCCCC CNATTGACGT CAATGACGGT AAATGGCCCG CCTGGCATTA 121 TGCCCAGTAC ATGACCTTAT GGGACTTTCC TACTTGGCAG TACATCTACG TATTAGTCAT 181 CGCTATTACC ATGGTGATGC GGTTTTGGCA GTACATCAAT GGGCGTGGAT AGCGGTTTGA 241 CTCACGGGGA TTTCCAAGTC TCCACCCCAT TGACGTCAAT GGGAGTTTGT TTTGGCACCA 301 AAATCAACGG GACTTTCCAA AATGTCGTAA CAACTCCGCC CCATTGACGC AAATGGGCGG 361 TAGGCGTGTA CGGTGGGAGG TCTATATAAG CAGAGCTGGT TTAGTGAACC GTCAGATCCG 421 CTAGCATGGA CAAGAAGTAC AGCATCGGCC TGGACATCGG CACCAACTCT GTGGGCTGGG 481 CCGTGATCAC CGACGACTAC AAGGTGCCCA GCAAGAAATT CAAGGTGCTG GGCAACACCG 541 ACCGGCACAG CATCAAGAAG AACCTGATCG GCGCCCTGCT GTTCGGCTCT GGCGAAACAG 601 CCGAGGCCAC CCGGCTGAAG AGAACCGCCA GAAGAAGATA CACCAGACGG AAGAACCGGA 661 TCTGCTATCT GCAAGAGATC TTCNGCAACG AGATGGCCAA GGTGGACGAC AGCTTCTTCC 721 ACAGACTGGA AGAGTCCTTC CTGGTGGAAG AGGATAAGAA GCACGAGCGG CNCCCCATCT 781 TCNGCAACAT CGTGGACGAN GTGGCCTANC ACGAGAANNT ANCCCACCAT CTACNACCTG 841 ANAAAGAAGC TGGCCGACAG CANCGACAAN GNCCGACCTG AGACTGATCT ACNNGGNCCN 901 GGCCCANATG ATCNAGTTCC GGGGCCACTT CCTGNTCGAG GGCGANCNTG AACCCCNACN 961 NCNNCNANNN NGNANNANCT GTNCATNCNG CTNGGTGCNN NNCTACNANT NNNNNTNTNC 1021 NANGNAAAAC CNNNNTNNNN NNNNNN // |
Primer: FP-N_F1 (Pr0920) Region: EGFP 3',Bsr 5' Sequence file: RDB16763_A8Kkj.seq |
>16763_16763_B2G6F_FP-N_F1_B06_06_ABI24.ab1 1 NNNNNNNNNN NNNNNCNNNN NNNNNNCNTG NAGCAGCACG ACTTCTTCNA GTCCGCCATG 61 CCCGAAGGCT ACGTCCAGGA GCGCACCATC TTCTTCAAGG ACGACGGCAA CTACAAGACC 121 CGCGCCGAGG TGAAGTTCGA GGGCGACACC CTGGTGAACC GCATCGAGCT GAAGGGCATC 181 GACTTCAAGG AGGACGGCAA CATCCTGGGG CACAAGCTGG AGTACAACTA CAACAGCCAC 241 AACGTCTATA TCATGGCCGA CAAGCAGAAG AACGGCATCA AGGTGAACTT CAAGATCCGC 301 CACAACATCG AGGACGGCAG CGTGCAGCTC GCCGACCACT ACCAGCAGAA CACCCCCATC 361 GGCGACGGCC CCGTGCTGCT GCCCGACAAC CACTACCTGA GCACCCAGTC CGCCCTGAGC 421 AAAGACCCCA ACGAGAAGCG CGATCACATG GTCCTGCTGG AGTTCGTGAC CGCCGCCGGG 481 ATCACTCTCG GCATGGACGA GCTGTACAAG TACTCAGATC CAATGAAAAC ATTTAACATT 541 TCTCAACAGG ATCTAGAATT AGTAGAAGTA GCGACAGAGA AGATTACAAT GCTTTATGAG 601 GATAATAAAC ATCATGTGGG AGCGGCAATT CGTACGAAAA CAGGAGAAAT CATTTCGGCA 661 GTACATATTG AAGCGTATAT AGGACGAGTA ACTGTTTGTG CAGAAGCCAT TGCGATTGGT 721 AGTGCAGTTT CGAATGGACA AAAGGATTTT GACACGATTG TAGCTGTTAG ACACCCTTAT 781 TCTGACGAAG TAGATAGAAG TATTCGAGTG GTAAGTCCTT GTGGTATGTG TAGGGAGTTG 841 ATTTCAGACT ATGCACNAGA TTGTTTTGTG TTAATAGAAA TGNNTGGNAA GTTAGTCAAA 901 ACTACGANTG ANNAACTCAT TNNNCTCNAA TATANCCGAA ANTNANGNAN NCNNNCNNAC 961 CGCGGGCCCG GGNNNCNNNN GNATCNAGAN NNCTGNTNAN NANTCNGCCN NNNNNNNNTN 1021 NNNNNNGNNT TTNNNNNNNN TNNAAAANNN NNNNNNN // |
Primer: EGFP-M_R (Pr0743) Region: EGFP 5',T2A,SV40 NLS,Cas9 3' Sequence file: RDB16763_A8Kkk.seq |
>D05970A1_A8Kk_2_EGFP-M_R_F08_06_ABI08.ab1 1 NNNNNNNNNN NNNNNNNNNN NNGNNGGNNC TTGNNGTTCN CCTTGNNGCC GTTCTTCTGC 61 TTGTCGGCCA TGATATAGAC GTTGTGGCTG TTGTAGTTGT ACTCCAGCTT GTGCCCCAGG 121 ATGTTGCCGT CCTCCTTGAA GTCGATGCCC TTCAGCTCGA TGCGGTTCAC CAGGGTGTCG 181 CCCTCGAACT TCACCTCGGC GCGGGTCTTG TAGTTGCCGT CGTCCTTGAA GAAGATGGTG 241 CGCTCCTGGA CGTAGCCTTC GGGCATGGCG GACTTGAAGA AGTCGTGCTG CTTCATGTGG 301 TCGGGGTAGC GGCTGAAGCA CTGCACGCCG TAGGTCAGGG TGGTCACGAG GGTGGGCCAG 361 GGCACGGGCA GCTTGCCGGT GGTGCAGATG AACTTCAGGG TCAGCTTGCC GTAGGTGGCA 421 TCGCCCTCGC CCTCGCCGGA CACGCTGAAC TTGTGGCCGT TTACGTCGCC GTCCAGCTCG 481 ACCAGGATGG GCACCACCCC GGTGAACAGC TCCTCGCCCT TGCTCACCAT GGTGGCGACC 541 GGTATCGATC GTGGGCCAGG ATTCTCCTCG ACGTCACCGC ATGTTAGCAG ACTTCCTCTG 601 CCCTCTCCAC TGCCGTTAAC CACTTTGCGC TTTTTCTTGG GGTCGCCTCC CAGCTGAGAC 661 AGGTCGATCC GTGTCTCGTA CAGGCCGGTG ATGCTCTGGT GGATCAGGGT GGCGTCCAGC 721 ACCTCTTTGG TGCTGGTGTA CCTCTTCCGG TCGATGGTGG TGTCNAAGTA CTTGAANGCG 781 GCAGGGGCTC NCAGGTTGGT CAGGGTAAAC ANGTGGATGA TATTCTCGGN CTGCTCTCTG 841 ATGGGCTTAT CCCNGGNGCT TGTTGTANGC GCTCANCACC TTGTCNNGGT TGGCATCGGC 901 CANGATCNNG CGCTTGGANA NNTCNCTAAT CTGNTCNATG ATNTCGTNNN GNNNGNGCTT 961 GTGCTGNTNC NCNAACAGCT GTTTCNGCTN ATTATNCNNN GGGGGANNCN NTNNNNCTNN 1021 NCNNNNNNGN NTNNNNNNNN NN // |
Please visit Sequencing and PCR primers for primer information.
Original, user report and related articles
original | Nagasaki, A., A genome editing vector that enables easy selection and identification of knockout cells. Plasmid 98: 37-44 (2018). PMID 30196057. [link to RRC of NBRP] |
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reference | Zhao, J., Development of aptamer-based inhibitors for CRISPR/Cas system. Nucleic Acids Res. 49 (3): 1330-1344 (2021). PMID 33123724. |
reference | Yamagishi, A., The Structural Function of Nestin in Cell Body Softening is Correlated with Cancer Cell Metastasis. Int. J. Biol. Sci. 15 (7): 1546-1556 (2019). PMID 31337983. |
2024.03.26
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