Home   Clone set   Gene Expression   Gene Analysis   Search   Literature  
BioResource Center RIKEN BRC DNA BANK
  Genome Network Human   NRCD Human   NIA/NIH Mouse   ERATO Mouse   Xenopus EST   Ciona EST

cDNA Cloned Library

Xenopus EST Clones

  Xenopus EST Clone (ja)   Xenopus EST Clone (en)   Data Sheet

Clone Information

Xenopus tropicalis (Silurana tropicalis) and X. laevis EST clones were analyzed by "Xenopus, National BioResource Project" and deposited by Drs. Naoto Ueno, National Institute of Basic Biology and Masanori Taira, University of Tokyo; Individual clones are available.
RDB no.LibraryClones
RDB 6075X. tropicalis embryo EST clones(ex. st10a01 )
RDB 6129X. laevis anterior neuroectoderm EST clones(ex. XL410a01ex)
RDB 6235X. laevis anterior endomesoderm EST clones(ex. xlk51a01)
RDB 6726X. laevis Keller explans EST clonesXL221a01ex to XL341p24ex
RDB 6727X. laevis whole embryo(stage 10.5) EST clonesXL111a01 to XL220p24
RDB 6728X. laevis whole embryo(stage 15) EST clonesXL001a01 to XL050p24
RDB 6729X. laevis whole embryo(stage 25) EST clonesXL051a01 to XL110p24

Please go to the following site at
http://www.shigen.nig.ac.jp/xenopus/ests/queryForm.jsp to find EST clones.

Further information is available at "Xenopus, National BioResource Project" (http://shigen.lab.nig.ac.jp/xenopus/top.jsp).



1.RDB 6075Xenopus tropicalis EST clones
1.1Strain information
SpeciesXenopus tropicalis (Silurana tropicalis)
StrainNigelian line 6th generation (N6)
1.2Clone information
VectorpCS22+ (Ampr)
Insertgastrula cDNA
HostXL1 Blue, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryXenopus tropicalis embryo gastrula
1.3Reference
   Blumberg,B., Kitayama,A. and Ueno,N. (2006) cDNA library of Xenopus tropicalis gastrula embryos. Unpublished.

go to Head


1.RDB 6129Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpCS105 (Ampr)
Insertanterior neuroectoderm cDNA from late gastrula (stage 12.5)
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryOsada Taira anterior neuroectoderm (ANE) pCS105 cDNA library
1.3Reference
   Unpublished

go to Head


1.RDB 6235Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpCS105 (Ampr)
Insertanterior endomesoderm cDNA from late gastrula (stage 12.5 )
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryOsada Taira anterior endomesoderm (AEM) pCS105 cDNA library
1.3Reference
   Unpublished

go to Head


1.RDB 6726Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpCS2p+ (Ampr)
InsertKeller explans
mixture of equivalent stages 10.5-15 (early gastrula to mid neurula)
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryYamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library
1.3Reference
   Unpublished

go to Head


1.RDB 6727Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpBS (Ampr)
Insertwhole embryo (stage 10.5 )
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryNIBB Mochii normalized Xenopus early gastrula library
1.3Reference
   Unpublished

go to Head


1.RDB 6728Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpBS (Ampr)
Insertwhole embryo (stage 15 )
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryNIBB Mochii normalized Xenopus neurula library
1.3Reference
   Unpublished

go to Head


1.RDB 6729Xenopus laevis EST clone
1.1Strain information
SpeciesXenopus laevis
Strain 
1.2Clone information
VectorpBS (Ampr)
Insertwhole embryo (stage 25 )
HostDH5alpha, E. coli
Clone dataavailable at the "Download" page at http://xenopus.nibb.ac.jp
LibraryNIBB Mochii normalized Xenopus tailbud library
1.3Reference
   Unpublished

go to Head


Nucleotide Sequence of Clones

Clone ID sequence 1 sequence 2 sequence 3 pdf
ST12L24 ST12L24a.seq ST12L24b.seq   ST12L24.pdf
ST32E22 ST32E22a.seq     ST32E22.pdf
ST58J17 ST58J17a.seq     ST58J17.pdf
XL003C20 XL003C20a.seq XL003C20b.seq    
XL005O06 XL005O06a.seq      
XL012M22 XL012M22a.seq XL012M22b.seq   XL012M22.pdf
XL015O20 XL015O20a.seq XL015O20b.seq   XL015O20.pdf
XL016D23 XL016D23a.seq      
XL038P10 XL038P10a.seq XL038P10b.seq   XL038P10.pdf
XL043I05 XL043I05a.seq XL043I05b.seq    
XL047L24 XL047L24a.seq XL047L24b.seq    
XL049B08 XL049B08a.seq XL049B08b.seq   XL049B08.pdf
XL049B17 XL049B17a.seq XL049B17b.seq    
XL058A08 XL058A08a.seq XL058A08b.seq   XL058A08.pdf
XL060M19 XL060M19a.seq XL060M19b.seq    
XL065J24 XL065J24a.seq XL065J24b.seq    
XL069C09 XL069C09a.seq XL069C09b.seq    
XL078D05 XL078D05a.seq XL078D05b.seq    
XL084F01 XL084F01a.seq XL084F01b.seq    
XL087M11 XL087M11a.seq XL087M11b.seq   XL087M11.pdf
XL089C16 XL089C16a.seq XL089C16b.seq   XL089C16.pdf
XL099E15 XL099E15a.seq XL099E15b.seq   XL099E15.pdf
XL100C07 XL100C07a.seq XL100C07b.seq   XL100C07.pdf
XL104F10 XL104F10a.seq XL104F10b.seq    
XL106I10 XL106I10a.seq XL106I10b.seq    
XL107F23 XL107F23a.seq   XL107F23c.seq XL107F23.pdf
XL143J04 XL143J04a.seq XL143J04b.seq    
XL143O14 XL143O14a.seq      
XL146e06 XL146e06a.seq XL146e06b.seq   XL146e06.pdf
XL149A16 XL149A16a.seq XL149A16b.seq    
XL150N02 XL150N02a.seq XL150N02b.seq    
XL151H21 XL151H21a.seq XL151H21b.seq   XL151H21.pdf
XL162J08 XL162J08a.seq XL162J08b.seq   XL162J08.pdf
XL169M18 XL169M18a.seq XL169M18b.seq   XL169M18.pdf
XL181L11 XL181L11a.seq XL181L11b.seq   XL181L11.pdf
XL185H13 XL185H13a.seq XL185H13b.seq   XL185H13.pdf
XL190I12 XL190I12a.seq XL190I12b.seq   XL190I12.pdf
XL200I23 XL200I23a.seq XL200I23b.seq   XL200I23.pdf
XL207o19 XL207o19a.seq XL207o19b.seq   XL207o19.pdf
XL209m01 XL209m01a.seq XL209m01b.seq   XL209m01.pdf
XL216e04 XL216e04a.seq XL216e04b.seq   XL216e04.pdf
XL219N18 XL219N18a.seq XL219N18b.seq   XL219N18.pdf
XL224F19 XL224F19a.seq XL224F19b.seq    
XL236P21 XL236P21a.seq      
XL243P03 XL243P03a.seq XL243P03b.seq    
XL280N24 XL280N24a.seq XL280N24b.seq   XL280N24.pdf
XL280N24 XL280N24_090603a.seq XL280N24_090603b.seq    
XL284H13 XL284H13a.seq      
XL288D04 XL288D04a.seq XL288D04b.seq    
XL290d23ex XL290d23exa.seq XL290d23exb.seq   XL290d23ex.pdf
XL310O06 XL310O06a.seq XL310O06b.seq   XL310O06.pdf
XL312H22 XL312H22a.seq XL312H22b.seq    
XL317e13ex XL317e13exa.seq XL317e13exb.seq   XL317e13ex.pdf
XL458D19 XL458D19a.seq      
XL467M21 XL467M21a.seq XL467M21b.seq XL467M21c.seq  
XL470n16ex XL470n16exa.seq XL470n16exb.seq   XL470n16ex.pdf
XL498I14 XL498I14a.seq XL498I14b.seq   XL498I14.pdf
XLK66M15 XLK66M15a.seq XLK66M15b.seq   XLK66M15.pdf
XLK109G01 XLK109G01a.seq XLK109G01b.seq   XLK109G01.pdf
XLK126C05 XLK126C05a.seq XLK126C05b.seq   XLK126C05.pdf
XL045e02 XL045e02a.seq XL045e02b.seq   XL045e02.pdf
XL078p19 XL078p19a.seq XL078p19b.seq   XL078p19.pdf
XL097g21 XL097g21a.seq XL097g21b.seq   XL097g21.pdf
XL062o22 XL062o22a.seq XL062o22b.seq   XL062o22.pdf

go to Head



2014.12.10