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pEF/RTAdeltaN236Q/V5-myc/ER

Expression clone of Ricin A chain nontoxic mutant (RTAdelta). N236Q substitution.

Catalog number RDB13414
Resource name pEF/RTAdeltaN236Q/V5-myc/ER
Clone info. Expression clone of Ricin A chain nontoxic mutant (RTAdelta). N236Q substitution.
Comment RTAdelata: ricin nontoxic allele that lacks the critical residues for its toxicity of ricin A chain.
Vector backbone pEF/myc/ER (Plasmid)
Size of vector backbone 5.5 kb
Selectable markers Amp^r (E. coli), Neo^r (mammalian cells)
Gene/insert name Ricinus communis ricin A chain
Depositor|Developer Suzuki, Tadashi |
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External Database
Ricinus communis ricin A chain

            Reference sequence
              

            Distribution information

            Please check terms and conditions set forth by the depositor, which are specified in the RIKEN BRC Catalog and/or Web Catalog.
            Terms and conditions set forth by the DEPOSITOR Prior to requesting the BIOLOGICAL RESOURCE, the RECIPIENT must obtain approval from the DEPOSITOR using the Approval Form. In publishing the research results obtained by use of the BIOLOGICAL RESOURCE, a citation of literature(s) designated by the DEPOSITOR is requested. (Proc. Natl. Acad. Sci. U.S.A., 112 (5): 1398-1403 (2015))
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            提供条件 利用者は提供承諾書を用いて、事前に寄託者の承認を得る。 利用者は、研究成果の公表にあたって寄託者の指定する文献を引用する (Proc. Natl. Acad. Sci. U.S.A., 112 (5): 1398-1403 (2015))。
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            RDB13414 pEF/RTAdeltaN236Q/V5-myc/ER DNA solution

            Please review the QC test results indicated by check icon below as well as clone information before placing your order.

            References and tips

            Electronic file

            Original reference

            original Huang, C., Endo-beta-N-acetylglucosaminidase forms N-GlcNAc protein aggregates during ER-associated degradation in Ngly1-defective cells. Proc. Natl. Acad. Sci. U.S.A. 112 (5): 1398-1403 (2015). PMID 25605922.

            Further references such as user reports and related articles (go to bottom)

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            Sequence information

            RIKEN BRC has sequenced portions of this material for quality test.
            Please review the QC test results indicated by check icon as well as clone information before placing your order.

            Test sheet RDB13414_A5E1p1.pdf check

            Nucleotide sequence of a portion of this resource (if available).

            Primer: EF1a-C_F
            Sequence file: RDB13414_A5E1a.seq check
            >13414-13414_2_EF1a-C_F_B02_05.ab1
                1 TCAGGGGATT GCCTTTTTGA GTTTGGATCT TGGTTCATTC TCAAGCCTCA GACAGTGGTT
               61 CAAAGTTTTT TTCTTCCATT TCAGGTGTCG TGAACACGTG GCCACCATGG GATGGAGCTG
              121 TATCATCCTC TTCTTGGTAG CAACAGCTAC AGGTAAGGGG TTAACAGTAG CAGGCTTGAG
              181 GTCTGGACAT ATATATGGGT GACAATGACA TCCACTTTGC CTTTCTCTCC ACAGGCGCGC
              241 ACTCCCAGGT CCAACTGCAG ATATTCCCCA AACAATACCC AATTATAAAC TTTACCACAG
              301 CGGGTGCCAC TGTGCAAAGC TACACAAACT TTATCAGAGC TGTTCGCGGT CGTTTAACAA
              361 CTGGAGCTGA TGTGAGACAT GAAATACCAG TGTTGCCAAA CAGAGTTGGT TTGCCTATAA
              421 ACCAACGGTT TATTTTAGTT GAACTCTCAA ATCATGCAGA GCTTTCTGTT ACATTAGCCC
              481 TGGATGTCAC CAATGCATAT GTGGTCGGCT ACCGTGCTGG AAATAGCGCA TATTTCTTTC
              541 ATCCTGACAA TCAGGAAGAT GCAGAAGCAA TCACTCATCT TTTCACTGAT GTTCAAAATC
              601 GATATACATT CGCCTTTGGT GGTAATTATG ATAGACTTGA ACAACTTGCT GGTAATCTGA
              661 GAGAAAATAT CGAGTTGGGA AATGGTCCAC TAGAGGAGGC TATCTCAGCG CTTTATTATT
              721 ACAGTACTGG TGGCACTCAG CTTCCAACTC TGGCTCGTTC CTTTATAATT TGCATCCAAA
              781 TGATTTTCCA ATATATTGAG GGAGAAATGC GCACGAGAAT TAGGTACAAC CGGAGATCTG
              841 CACCAGATCC TAGCGTAATT ACACTTGAGA ATAGTTGGGG GAGACTTTCC ACTGCAATTC
              901 AAGAGTCTAA CCAAGGAGCC TTTGCTAGTC CAATTCAACT GCAAAGACGT CAAGGTTCCA
              961 AATTCAGTGT GTACGATGTG AGTATATTAA TCCCTATCAT AGCTCTCATG GGTGTATAGA
             1021 TGCGCACCTC CACCCATCGT CACAGTTTTC TCGAGATCAA ACGGGGGTAA GCCTATCCCT
            1081 ATCTCTCATC CGATCTCGAT TCTACCGGAC CGCAGAAAGC AAAAAAAACG TA
            //
            Primer: BGH_rev
            Sequence file: RDB13414_A5E1b.seq check
            >13414-13414_2_BGH-rev_C02_08.ab1
                1 GTTACAGAAT CAGCTCGTGC TTCTCGCTTG CGGCCCCATT CAGATCCTCT TCTGAGATGA
               61 GTTTTTGTTC TGCGGCCGTA GAATCGAGAC CGAGGAGAGG GTTAGGGATA GGCTTACCCC
              121 GTTTGATCTC GAGAAACTGT GACGATGGTG GAGGTGCGCA TCTATACACC ATGAGAGCTA
              181 TGATAGGGAT TAATATACTC ACATCGTACA CACTGAATTT GGAACCTTGA CGTCTTTGCA
              241 GTTGAATTGG ACTAGCAAAG GCTCCTTGGT TAGACTCTTG AATTGCAGTG GAAAGTCTCC
              301 CCCAACTATT CTCAAGTGTA ATTACGCTAG GATCTGGTGC AGATCTCCGG TTGTACCTAA
              361 TTCTCGTGCG CATTTCTCCC TCAATATATT GGAAAATCAT TTGGATGCAA ATTATAAAGG
              421 AACGAGCCAG AGTTGGAAGC TGAGTGCCAC CAGTACTGTA ATAATAAAGC GCTGAGATAG
              481 CCTCCTCTAG TGGACCATTT CCCAACTCGA TATTTTCTCT CAGATTACCA GCAAGTTGTT
              541 CAAGTCTATC ATAATTACCA CCAAAGGCGA ATGTATATCG ATTTTGAACA TCAGTGAAAA
              601 GATGAGTGAT TGCTTCTGCA TCTTCCTGAT TGTCAGGATG AAAGAAATAT GCGCTATTTC
              661 CAGCACGGTA GCCGACCACA TATGCATTGG TGACATCCAG GGCTAATGTA ACAGAAAGCT
              721 CTGCATGATT TGAGAGTTCA ACTAAAATAA ACCGTTGGTT TATAGGCAAA CCAACTCTGT
              781 TTGGCAACAC TGGTATTTCA TGTCTCACAT CAGCTCCAGT TGTTAAACGA CCGCGAACAG
              841 CTCTGATAAA GTTTGTGTAG CTTTGCACAG TGGCACCCGC TGTGGTAAAG TTTATAATTG
              901 GGTATTGTTT GGGGGAATAT CTGCAGTTGG ACCTGGGAGT GCGCGCCTGT GGAGAGAAAG
              961 GCAAAGTGGA TGTCATTGTC ACCCATATAT ATGTCCAGAC CCTCAAGCCC TGCTACTGTT
             1021 TAACCCCCTT ACCCTGTAGC TGTTTGCTAC CCAAAGAAAG AGGATGGATA CAGGCTCCAA
             1081 TCCCCATGGA TGCAACGTGT CAACGACACC TGAAAATGGT AGGAAAAAAA AACCTTTTGG
            1141 CTAC
            //
            Primer: SV40pro_F
            Sequence file: RDB13414_A5E1c.seq check
            >13414-13414_2_SV40pro_F_D02_11.ab1
                1 ACTGTCGGTG GCATTCAGAG TAGTGAGGAG GCTTTTTTGG AGGCCTAGGC TTTTGCAAAA
               61 AGCTCCCCCC CCGGGAGGTC CACAATGGTT GAACAAGATG GATTGCACGC AGGTTCTCCG
              121 GCCGCTTGGG TGGAGAGGCT ATTCGGCTAT GACTGGGCAC AACAGACAAT CGGCTGCTCT
              181 GATGCCGCCG TGTTCCGGCT GTCAGCGCAG GGGCGCCCGG TTCTTTTTGT CAAGACCGAC
              241 CTGTCCGGTG CCCTGAATGA ACTCCAGGAC GAGGCAGCGC GGCTATCGTG GCTGGCCACG
              301 ACGGGCGTTC CTTGCGCAGC TGTGCTCGAC GTTGTCACTG AAGCGGGAAG GGACTGGCTG
              361 CTATTGGGCG AAGTGCCGGG GCAGGATCTC CTGTCATCTC ACCTTGCTCC TGCCGAGAAA
              421 GTATCCATCA TGGCTGATGC AATGCGGCGG CTGCATACGC TTGATCCGGC TACCTGCCCA
              481 TTCGACCACC AAGCGAAACA TCGCATCGAG CGAGCACGTA CTCGGATGGA AGCCGGTCTT
              541 GTCGATCAGG ATGATCTGGA CGAAGAGCAT CAGGGGCTCG CGCCAGCCGA ACTGTTCGCC
              601 AGGCTCAAGG CGCGTATGCC CGACGGCGAG GATCTCGTCG TGACTCATGG CGATGCCTGC
              661 TTGCCGAATA TCATGGTGGA AAATGGCCGC TTTTCTGGAT TCATCGACTG TGGCCGGCTG
              721 GGTGTGGCGG ACCGCTATCA GGACATAGCG TTGGCTACCC GTGATATTGC TGAAGAGCTT
              781 GGCGGCGAAT GGGCTGACCG CTTCCTCGTG CTTTACGGTA TCGCCGCTCC CGATTCGCAG
              841 CGCATCGCCT TCTATCGCCT TCTTGACGAG TTCTTCTGAG CGGGACTCTG GGGGTTCGAA
              901 ATGACCGACC AAGCGACGCC CAACCTGCCA TCACGAGATT TCGATTCCAC CGCCGCCCTT
              961 CTATGAAAGG TTGGGCTTCG GAATCGTTTT CCGGGACGCC GGGCTGGGAT GATCCTCCAG
             1021 CGCGGGGATC TCATGCTTGG AGTCCTCCGC CACCCCAACT GGTTATGGCA GCCTTATAAT
             1081 TGATACGATA AAGCCAATAG CCATTCACGA AGTTCACTAA TAAAGGCATT CACGTGCAAT
            1141 TCCGTTAGCG ATG
            //

            Please visit Sequencing and PCR primers for primer information.


            References

            Original, user report and related articles

            original Huang, C., Endo-beta-N-acetylglucosaminidase forms N-GlcNAc protein aggregates during ER-associated degradation in Ngly1-defective cells. Proc. Natl. Acad. Sci. U.S.A. 112 (5): 1398-1403 (2015). PMID 25605922.

            2022.05.17

            GNP_filter3_RDBDEP_html_220516.pl